A B C D E F G H I K L M N P R S T V W

C

CacheFilesLoader - Class in bicliqueviz

This class is used to load graphs from cache files

CacheFilesLoader(String, ProgWin) - Constructor for class bicliqueviz.CacheFilesLoader

CacheFilesSaver - Class in bicliqueviz

This class manages the cache files of a bigraph to optimize the initialisation after first creation of the bigraph

CacheFilesSaver(String, BicliqueTreeMenu, BiGraph) - Constructor for class bicliqueviz.CacheFilesSaver

changeGraph(Graph<VertexObj, EdgeObj>) - Method in class bicliqueviz.BiGraph

changeSorting() - Method in class bicliqueviz.BicliqueTreeMenu

clearBicliqueList() - Method in class bicliqueviz.BiCliqueWin

Clear selection of biclique lists in the tabbed panes

clearGraph() - Method in class bicliqueviz.BiGraph

clears the graph

clearGraphSelection() - Method in class bicliqueviz.BiCliqueWin

Clear selection of the graph

clearList() - Method in class bicliqueviz.VertexCommList

clears the list

clearListSelection() - Method in class bicliqueviz.BiCliqueWin

Clear selection of all lists in the tabbed panes (biclique lists) and the communities list

clearVertexCommList() - Method in class bicliqueviz.BiCliqueWin

Clears the vertex community list

CommTreeNodeBComparer - Class in bicliqueviz

Comparer for communities in the tree menu (sort by type B)

CommTreeNodeBComparer() - Constructor for class bicliqueviz.CommTreeNodeBComparer

CommTreeNodeComparer - Class in bicliqueviz

Comparer for communities in the tree menu (sort by type A)

CommTreeNodeComparer() - Constructor for class bicliqueviz.CommTreeNodeComparer

Community - Class in bicliqueviz

This class represents a given community in a bipartite graph It contains information about the maximal bicliques within it.

Community(Vector<Biclique>, int, String) - Constructor for class bicliqueviz.Community

CommunityComparer - Class in bicliqueviz

Comparer for communities

CommunityComparer() - Constructor for class bicliqueviz.CommunityComparer

CommunityEdgeToolTip - Class in bicliqueviz

Tool tip for edges in community networks

CommunityEdgeToolTip() - Constructor for class bicliqueviz.CommunityEdgeToolTip

CommunityGraph - Class in bicliqueviz

Class community network

CommunityGraph(BicliqueTreeMenu, InfoFile) - Constructor for class bicliqueviz.CommunityGraph

Creates instance of community network (will be shown in a seperate window)

CommunitySizeShape - Class in bicliqueviz

Class for defining community shape and size

CommunitySizeShape() - Constructor for class bicliqueviz.CommunitySizeShape

CommunityToolTip - Class in bicliqueviz

Tool tip for communities (the main graph)

CommunityToolTip() - Constructor for class bicliqueviz.CommunityToolTip

CommunityTreeNode - Class in bicliqueviz

Class for community tree node in the tree menu (k=a,b folders)

CommunityTreeNode(int, int) - Constructor for class bicliqueviz.CommunityTreeNode

compare(AutomatedTreeNode, AutomatedTreeNode) - Method in class bicliqueviz.CommTreeNodeBComparer

compare(AutomatedTreeNode, AutomatedTreeNode) - Method in class bicliqueviz.CommTreeNodeComparer

compare(Community, Community) - Method in class bicliqueviz.CommunityComparer

compare(Integer, Integer) - Method in class bicliqueviz.IntComparer

compare(NumberPair, NumberPair) - Method in class bicliqueviz.NumberPairComparer

compare(VertexObj, VertexObj) - Method in class bicliqueviz.VertexObjComparator

createBiclique(Vector<Biclique>) - Method in class bicliqueviz.BiGraph

createBicliques() - Method in class bicliqueviz.CacheFilesLoader

createCacheFiles() - Method in class bicliqueviz.CacheFilesSaver

Creates the cache files

createCommunityNetwork() - Method in class bicliqueviz.BicliqueTreeMenu

Creates a window with the community network of the selected fixed k=a,b

createGraph(BicliqueTreeMenu) - Method in class bicliqueviz.CommunityGraph

Creates the graph and window it should be shown in

createOverlapMatrix(ProgWin) - Method in class bicliqueviz.BicliqueTreeMenu

Creates overlap matrix and returns all the communities in the bigraph

createTree(ProgWin, InfoFile) - Method in class bicliqueviz.BicliqueTreeMenu

Creates menu tree

createTreeMenu(SortedTreeNode, Vector<TreeSet<Community>>, Vector<Vector<Biclique>>, Vector<Biclique>) - Method in class bicliqueviz.CacheFilesLoader

Creates the tree menu

CustomMouse - Class in bicliqueviz

DefaultModalGraphMouse is a PluggableGraphMouse class that pre-installs a large collection of plugins for picking and transforming the graph.

CustomMouse(BiCliqueWin) - Constructor for class bicliqueviz.CustomMouse

create an instance with default values

CustomMouse(float, float, BiCliqueWin) - Constructor for class bicliqueviz.CustomMouse

create an instance with passed values

CustomMouse.ModeKeyAdapter - Class in bicliqueviz

CustomMouse.ModeKeyAdapter(ModalGraphMouse) - Constructor for class bicliqueviz.CustomMouse.ModeKeyAdapter

CustomMouse.ModeKeyAdapter(char, char, ModalGraphMouse) - Constructor for class bicliqueviz.CustomMouse.ModeKeyAdapter

CustomPickingPlugin<V,E> - Class in bicliqueviz

PickingGraphMousePlugin supports the picking of graph elements with the mouse.

CustomPickingPlugin(BiCliqueWin) - Constructor for class bicliqueviz.CustomPickingPlugin

create an instance with default settings

CustomPickingPlugin(int, int, BiCliqueWin) - Constructor for class bicliqueviz.CustomPickingPlugin

create an instance with overides

CustomPopupPlugin - Class in bicliqueviz

This is a custom popup plugin made for a JUNG using some examples from JUNGs website

CustomPopupPlugin() - Constructor for class bicliqueviz.CustomPopupPlugin

CustomPopupPlugin(int) - Constructor for class bicliqueviz.CustomPopupPlugin

CustomPopupPlugin2 - Class in bicliqueviz

This is a custom popup plugin made for a JUNG using some examples from JUNGs website

CustomPopupPlugin2() - Constructor for class bicliqueviz.CustomPopupPlugin2

CustomPopupPlugin2(int) - Constructor for class bicliqueviz.CustomPopupPlugin2

CustomVertexLabelRenderer - Class in bicliqueviz

Class for custom vertex label rendering

CustomVertexLabelRenderer() - Constructor for class bicliqueviz.CustomVertexLabelRenderer

CustomVertexLabelRenderer(Renderer.VertexLabel.Position) - Constructor for class bicliqueviz.CustomVertexLabelRenderer

CustomVertexLabelRenderer.InsidePositioner - Class in bicliqueviz

CustomVertexLabelRenderer.InsidePositioner() - Constructor for class bicliqueviz.CustomVertexLabelRenderer.InsidePositioner

CustomVertexLabelRenderer.OutsidePositioner - Class in bicliqueviz

CustomVertexLabelRenderer.OutsidePositioner() - Constructor for class bicliqueviz.CustomVertexLabelRenderer.OutsidePositioner

CustomVertexRenderer - Class in bicliqueviz

Class for custom vertex rendering

CustomVertexRenderer() - Constructor for class bicliqueviz.CustomVertexRenderer

CustomVV<V,E> - Class in bicliqueviz

Adds mouse behaviors and tooltips to the graph visualization base class

CustomVV(Layout<V, E>) - Constructor for class bicliqueviz.CustomVV

CustomVV(Layout<V, E>, Dimension) - Constructor for class bicliqueviz.CustomVV

Create an instance with passed parameters.

CustomVV(VisualizationModel<V, E>) - Constructor for class bicliqueviz.CustomVV

Create an instance with passed parameters.

CustomVV(VisualizationModel<V, E>, Dimension) - Constructor for class bicliqueviz.CustomVV

Create an instance with passed parameters.